Assembly Summary

Assembly: Contigs File
Group: Pseudomonas aeruginosa Sample 1
# Contigs: 212
Min: 501
Max: 349,482
Average: 29,270
Median: 11,540
N50: 77,919
Sum: 6,205,268




Contig Coverage

Coverage Plots Coverage Data File

Length Reads Mapped at 0MM Reads Mapped at 1MM Total Reads Mapped % of Total Reads Mapped Average Coverage
Contig 1 349,482 557,980 123,571 681,551 3.13% 99.46
Contig 2 299,732 506,296 102,397 608,693 2.79% 103.57
Contig 3 282,989 409,259 85,073 494,332 2.27% 89.09
Contig 4 230,821 388,254 78,627 466,881 2.14% 103.16
Contig 5 192,723 322,746 66,413 389,159 1.79% 102.98
Contig 6 184,906 374,189 73,874 448,063 2.06% 123.58
Contig 7 151,644 289,572 54,509 344,081 1.58% 115.72
Contig 8 150,550 245,570 52,984 298,554 1.37% 101.14
Contig 9 116,678 154,998 30,473 185,471 0.85% 81.07
Contig 10 112,642 202,668 38,960 241,628 1.11% 109.40
Contig 11 110,729 207,744 45,202 252,946 1.16% 116.50
Contig 12 106,044 167,682 34,414 202,096 0.93% 97.19
Contig 13 97,960 159,900 28,144 188,044 0.86% 97.90
Contig 14 97,619 183,994 32,056 216,050 0.99% 112.87
Contig 15 88,640 130,244 27,338 157,582 0.72% 90.67
Contig 16 87,859 154,967 29,651 184,618 0.85% 107.17
Contig 17 86,374 149,549 32,788 182,337 0.84% 107.66
Contig 18 84,300 155,459 31,901 187,360 0.86% 113.35
Contig 19 83,319 112,350 23,043 135,393 0.62% 82.87
Contig 20 82,543 103,243 24,204 127,447 0.59% 78.74
Contig 21 80,683 147,646 31,910 179,556 0.82% 113.50
Contig 22 77,919 145,462 26,298 171,760 0.79% 112.42
Contig 23 77,372 104,913 20,386 125,299 0.58% 82.59
Contig 24 74,784 109,589 26,328 135,917 0.62% 92.69
Contig 25 74,414 127,701 25,440 153,141 0.70% 104.96
Contig 26 71,191 114,321 26,581 140,902 0.65% 100.94
Contig 27 68,516 131,355 27,416 158,771 0.73% 118.18
Contig 28 67,420 120,165 23,154 143,319 0.66% 108.41
Contig 29 65,605 96,169 21,187 117,356 0.54% 91.23
Contig 30 64,731 89,889 16,783 106,672 0.49% 84.04
Contig 31 63,099 82,752 18,746 101,498 0.47% 82.04
Contig 32 58,561 89,839 17,973 107,812 0.50% 93.89
Contig 33 56,890 108,864 22,520 131,384 0.60% 117.78
Contig 34 52,105 92,892 19,451 112,343 0.52% 109.96
Contig 35 51,866 70,435 16,134 86,569 0.40% 85.12
Contig 36 51,180 90,753 16,683 107,436 0.49% 107.06
Contig 37 50,397 68,454 12,542 80,996 0.37% 81.97
Contig 38 49,811 64,760 14,606 79,366 0.36% 81.26
Contig 39 48,163 78,462 16,292 94,754 0.44% 100.33
Contig 40 45,168 60,865 13,592 74,457 0.34% 84.07
Contig 41 44,796 72,695 14,028 86,723 0.40% 98.73
Contig 42 44,230 60,579 12,777 73,356 0.34% 84.58
Contig 43 42,965 81,578 16,644 98,222 0.45% 116.59
Contig 44 42,572 86,127 16,616 102,743 0.47% 123.08
Contig 45 42,110 56,736 13,343 70,079 0.32% 84.87
Contig 46 41,941 61,175 10,358 71,533 0.33% 86.98
Contig 47 40,604 59,293 13,091 72,384 0.33% 90.92
Contig 48 39,196 51,487 11,830 63,317 0.29% 82.39
Contig 49 38,072 58,968 13,574 72,542 0.33% 97.17
Contig 50 37,672 54,955 10,493 65,448 0.30% 88.60
Contig 51 36,793 47,513 10,495 58,008 0.27% 80.41
Contig 52 36,690 66,136 15,302 81,438 0.37% 113.20
Contig 53 35,451 65,554 14,047 79,601 0.37% 114.51
Contig 54 34,315 43,672 10,418 54,090 0.25% 80.39
Contig 55 33,814 44,808 8,944 53,752 0.25% 81.07
Contig 56 33,064 58,926 6,025 64,951 0.30% 100.19
Contig 57 32,761 58,326 13,107 71,433 0.33% 111.20
Contig 58 31,292 39,802 7,972 47,774 0.22% 77.86
Contig 59 30,259 46,376 10,215 56,591 0.26% 95.38
Contig 60 30,185 36,761 8,481 45,242 0.21% 76.44
Contig 61 29,681 55,255 11,400 66,655 0.31% 114.53
Contig 62 29,312 38,542 8,054 46,596 0.21% 81.07
Contig 63 28,205 44,209 9,000 53,209 0.24% 96.21
Contig 64 28,193 51,356 11,595 62,951 0.29% 113.88
Contig 65 27,802 34,754 7,274 42,028 0.19% 77.10
Contig 66 27,454 40,809 9,134 49,943 0.23% 92.78
Contig 67 27,192 36,429 8,460 44,889 0.21% 84.19
Contig 68 25,531 36,140 7,591 43,731 0.20% 87.36
Contig 69 25,495 43,937 10,084 54,021 0.25% 108.06
Contig 70 24,344 36,013 8,083 44,096 0.20% 92.38
Contig 71 23,924 38,804 6,596 45,400 0.21% 96.78
Contig 72 23,765 32,322 6,116 38,438 0.18% 82.49
Contig 73 23,349 33,062 6,641 39,703 0.18% 86.72
Contig 74 23,016 42,365 9,556 51,921 0.24% 115.05
Contig 75 22,905 30,376 6,602 36,978 0.17% 82.33
Contig 76 22,479 26,882 6,481 33,363 0.15% 75.69
Contig 77 22,189 27,598 6,894 34,492 0.16% 79.28
Contig 78 20,406 28,643 5,440 34,083 0.16% 85.18
Contig 79 20,183 26,048 6,408 32,456 0.15% 82.01
Contig 80 19,318 24,742 5,887 30,629 0.14% 80.86
Contig 81 19,066 30,049 6,296 36,345 0.17% 97.22
Contig 82 18,341 28,665 5,877 34,542 0.16% 96.05
Contig 83 18,141 20,139 4,690 24,829 0.11% 69.80
Contig 84 17,959 24,043 5,924 29,967 0.14% 85.10
Contig 85 17,835 24,143 5,721 29,864 0.14% 85.40
Contig 86 16,684 22,331 4,629 26,960 0.12% 82.41
Contig 87 16,269 20,289 4,465 24,754 0.11% 77.60
Contig 88 15,657 34,095 5,833 39,928 0.18% 130.06
Contig 89 15,515 21,956 4,307 26,263 0.12% 86.33
Contig 90 15,391 30,077 4,215 34,292 0.16% 113.63
Contig 91 15,046 21,476 5,473 26,949 0.12% 91.35
Contig 92 15,029 21,172 5,129 26,301 0.12% 89.25
Contig 93 14,835 25,305 5,288 30,593 0.14% 105.17
Contig 94 14,485 21,320 3,800 25,120 0.12% 88.44
Contig 95 14,344 17,521 3,916 21,437 0.10% 76.22
Contig 96 14,149 16,690 4,167 20,857 0.10% 75.18
Contig 97 13,631 26,437 5,200 31,637 0.15% 118.37
Contig 98 13,594 18,652 4,193 22,845 0.10% 85.71
Contig 99 13,411 26,554 5,095 31,649 0.15% 120.36
Contig 100 13,384 25,571 4,754 30,325 0.14% 115.55
Contig 101 13,016 25,084 4,967 30,051 0.14% 117.75
Contig 102 12,551 18,704 3,239 21,943 0.10% 89.16
Contig 103 12,105 23,298 4,966 28,264 0.13% 119.08
Contig 104 11,821 14,545 3,418 17,963 0.08% 77.50
Contig 105 11,548 14,427 3,291 17,718 0.08% 78.25
Contig 106 11,540 15,545 3,596 19,141 0.09% 84.59
Contig 107 11,176 13,945 3,534 17,479 0.08% 79.76
Contig 108 11,017 15,601 3,109 18,710 0.09% 86.61
Contig 109 10,679 15,489 3,077 18,566 0.09% 88.67
Contig 110 9,888 13,026 2,904 15,930 0.07% 82.16
Contig 111 9,789 14,589 3,799 18,388 0.08% 95.80
Contig 112 8,981 13,389 3,054 16,443 0.08% 93.37
Contig 113 8,795 11,371 2,887 14,258 0.07% 82.68
Contig 114 8,492 13,338 3,483 16,821 0.08% 101.02
Contig 115 7,983 11,458 2,107 13,565 0.06% 86.66
Contig 116 7,602 10,783 2,500 13,283 0.06% 89.11
Contig 117 7,452 9,285 2,433 11,718 0.05% 80.20
Contig 118 7,391 13,086 1,867 14,953 0.07% 103.18
Contig 119 7,380 8,733 2,147 10,880 0.05% 75.19
Contig 120 7,327 10,061 2,228 12,289 0.06% 85.54
Contig 121 7,208 8,667 2,242 10,909 0.05% 77.19
Contig 122 7,080 11,980 2,598 14,578 0.07% 105.01
Contig 123 6,389 8,614 1,656 10,270 0.05% 81.98
Contig 124 6,116 7,101 1,803 8,904 0.04% 74.25
Contig 125 6,010 7,672 2,020 9,692 0.04% 82.24
Contig 126 5,909 6,270 1,453 7,723 0.04% 66.66
Contig 127 5,827 6,821 1,686 8,507 0.04% 74.46
Contig 128 5,464 5,670 1,674 7,344 0.03% 68.55
Contig 129 5,417 13,976 4,202 18,178 0.08% 171.14
Contig 130 5,172 7,276 1,413 8,689 0.04% 85.68
Contig 131 4,522 5,545 1,297 6,842 0.03% 77.17
Contig 132 4,209 3,895 1,134 5,029 0.02% 60.94
Contig 133 3,942 5,833 1,183 7,016 0.03% 90.77
Contig 134 3,691 9,136 1,398 10,534 0.05% 145.55
Contig 135 3,633 7,038 1,319 8,357 0.04% 117.31
Contig 136 3,600 5,098 977 6,075 0.03% 86.06
Contig 137 3,544 4,000 1,054 5,054 0.02% 72.73
Contig 138 3,529 6,146 1,865 8,011 0.04% 115.77
Contig 139 3,502 5,815 1,192 7,007 0.03% 102.04
Contig 140 3,440 32,880 2,730 35,610 0.16% 527.94
Contig 141 3,429 5,618 645 6,263 0.03% 93.15
Contig 142 3,385 5,854 1,033 6,887 0.03% 103.76
Contig 143 3,260 5,373 966 6,339 0.03% 99.17
Contig 144 3,210 6,462 3,131 9,593 0.04% 152.41
Contig 145 3,146 7,840 1,183 9,023 0.04% 146.27
Contig 146 3,145 5,536 1,284 6,820 0.03% 110.59
Contig 147 3,117 6,446 686 7,132 0.03% 116.69
Contig 148 3,104 1,947 848 2,795 0.01% 45.92
Contig 149 3,093 8,121 524 8,645 0.04% 142.55
Contig 150 2,996 3,817 441 4,258 0.02% 72.48
Contig 151 2,606 4,421 977 5,398 0.02% 105.64
Contig 152 2,508 3,447 1,161 4,608 0.02% 93.70
Contig 153 2,495 2,797 747 3,544 0.02% 72.44
Contig 154 2,471 6,726 617 7,343 0.03% 151.56
Contig 155 2,439 5,850 2,169 8,019 0.04% 167.68
Contig 156 2,325 3,227 746 3,973 0.02% 87.15
Contig 157 2,148 42,485 5,572 48,057 0.22% 1141.02
Contig 158 1,981 28,677 4,881 33,558 0.15% 863.94
Contig 159 1,939 2,412 606 3,018 0.01% 79.38
Contig 160 1,929 2,494 1,126 3,620 0.02% 95.71
Contig 161 1,908 2,086 309 2,395 0.01% 64.02
Contig 162 1,868 1,866 515 2,381 0.01% 65.01
Contig 163 1,825 2,155 662 2,817 0.01% 78.72
Contig 164 1,716 16,937 1,850 18,787 0.09% 558.36
Contig 165 1,691 24,801 4,337 29,138 0.13% 878.79
Contig 166 1,647 1,560 676 2,236 0.01% 69.24
Contig 167 1,526 2,489 442 2,931 0.01% 97.96
Contig 168 1,468 4,087 1,084 5,171 0.02% 179.65
Contig 169 1,418 4,263 1,438 5,701 0.03% 205.04
Contig 170 1,416 1,546 333 1,879 0.01% 67.68
Contig 171 1,391 2,216 648 2,864 0.01% 105.01
Contig 172 1,379 14,915 2,984 17,899 0.08% 661.96
Contig 173 1,266 724 545 1,269 0.01% 51.12
Contig 174 1,255 2,988 1,132 4,120 0.02% 167.43
Contig 175 1,160 3,998 722 4,720 0.02% 207.52
Contig 176 1,153 2,855 456 3,311 0.02% 146.45
Contig 177 1,129 3,243 167 3,410 0.02% 154.04
Contig 178 1,036 2,538 408 2,946 0.01% 145.03
Contig 179 1,026 3,523 655 4,178 0.02% 207.68
Contig 180 1,003 1,143 282 1,425 0.01% 72.46
Contig 181 978 411 174 585 0.00% 30.51
Contig 182 962 14,613 2,652 17,265 0.08% 915.30
Contig 183 938 1,059 271 1,330 0.01% 72.31
Contig 184 920 1,538 101 1,639 0.01% 90.86
Contig 185 917 202 65 267 0.00% 14.85
Contig 186 913 2,007 573 2,580 0.01% 144.12
Contig 187 904 3,835 871 4,706 0.02% 265.49
Contig 188 888 3,817 518 4,335 0.02% 248.97
Contig 189 880 2,192 291 2,483 0.01% 143.90
Contig 190 874 1,623 335 1,958 0.01% 114.25
Contig 191 865 1,071 574 1,645 0.01% 96.99
Contig 192 828 1,391 257 1,648 0.01% 101.51
Contig 193 824 708 281 989 0.00% 61.21
Contig 194 812 2,002 309 2,311 0.01% 145.15
Contig 195 811 2,333 190 2,523 0.01% 158.66
Contig 196 798 11,564 1,948 13,512 0.06% 863.55
Contig 197 755 1,177 584 1,761 0.01% 118.95
Contig 198 731 1,749 451 2,200 0.01% 153.49
Contig 199 700 123 54 177 0.00% 12.90
Contig 200 693 1,703 240 1,943 0.01% 142.99
Contig 201 652 538 101 639 0.00% 49.98
Contig 202 637 599 334 933 0.00% 74.70
Contig 203 610 6,112 466 6,578 0.03% 549.96
Contig 204 605 974 1,515 2,489 0.01% 209.82
Contig 205 597 134 108 242 0.00% 20.67
Contig 206 574 796 66 862 0.00% 76.59
Contig 207 550 551 69 620 0.00% 57.49
Contig 208 545 946 630 1,576 0.01% 147.48
Contig 209 521 940 1,265 2,205 0.01% 215.84
Contig 210 514 195 255 450 0.00% 44.65
Contig 211 507 2,180 719 2,899 0.01% 291.62
Contig 212 501 1,449 309 1,758 0.01% 178.96