Assembly Summary

Assembly: Contigs File
Group: Pseudomonas aeruginosa Sample 2
# Contigs: 144
Min: 501
Max: 344,732
Average: 42,749
Median: 20,650
N50: 112,730
Sum: 6,155,897




Contig Coverage

Coverage Plots Coverage Data File

Length Reads Mapped at 0MM Reads Mapped at 1MM Total Reads Mapped % of Total Reads Mapped Average Coverage
Contig 1 344,732 998,397 115,693 1,114,090 4.29% 161.59
Contig 2 223,037 710,157 81,424 791,581 3.05% 177.46
Contig 3 217,488 782,156 92,413 874,569 3.37% 201.06
Contig 4 213,049 683,708 77,750 761,458 2.94% 178.71
Contig 5 211,590 623,502 68,790 692,292 2.67% 163.59
Contig 6 199,968 700,672 80,492 781,164 3.01% 195.32
Contig 7 197,404 484,719 51,894 536,613 2.07% 135.92
Contig 8 191,570 501,196 58,586 559,782 2.16% 146.10
Contig 9 151,969 470,343 54,286 524,629 2.02% 172.61
Contig 10 145,088 467,298 58,678 525,976 2.03% 181.26
Contig 11 142,646 388,231 46,525 434,756 1.68% 152.39
Contig 12 141,723 495,268 58,727 553,995 2.14% 195.45
Contig 13 127,221 397,566 42,865 440,431 1.70% 173.10
Contig 14 125,047 454,729 53,339 508,068 1.96% 203.15
Contig 15 123,182 356,449 42,824 399,273 1.54% 162.07
Contig 16 116,318 307,002 35,245 342,247 1.32% 147.12
Contig 17 116,231 422,309 46,864 469,173 1.81% 201.83
Contig 18 112,730 367,268 40,869 408,137 1.57% 181.02
Contig 19 110,783 415,702 50,136 465,838 1.80% 210.25
Contig 20 109,794 288,934 33,022 321,956 1.24% 146.62
Contig 21 97,422 265,386 33,228 298,614 1.15% 153.26
Contig 22 96,355 295,660 35,182 330,842 1.28% 171.68
Contig 23 94,835 299,665 37,677 337,342 1.30% 177.86
Contig 24 93,327 263,950 33,447 297,397 1.15% 159.33
Contig 25 91,942 304,108 36,101 340,209 1.31% 185.01
Contig 26 91,722 257,148 31,120 288,268 1.11% 157.14
Contig 27 89,920 329,466 36,110 365,576 1.41% 203.28
Contig 28 89,913 263,125 33,007 296,132 1.14% 164.68
Contig 29 88,781 280,257 31,460 311,717 1.20% 175.55
Contig 30 74,524 252,124 29,074 281,198 1.08% 188.66
Contig 31 71,390 204,022 25,414 229,436 0.88% 160.69
Contig 32 66,661 232,025 26,817 258,842 1.00% 194.15
Contig 33 64,963 204,652 24,846 229,498 0.88% 176.64
Contig 34 59,194 170,397 20,846 191,243 0.74% 161.54
Contig 35 58,655 214,467 26,392 240,859 0.93% 205.32
Contig 36 56,856 162,461 21,226 183,687 0.71% 161.54
Contig 37 52,621 178,048 22,158 200,206 0.77% 190.23
Contig 38 50,331 140,456 17,076 157,532 0.61% 156.50
Contig 39 49,448 186,645 21,154 207,799 0.80% 210.12
Contig 40 49,177 182,063 22,117 204,180 0.79% 207.60
Contig 41 48,714 177,835 20,388 198,223 0.76% 203.46
Contig 42 47,267 177,227 20,319 197,546 0.76% 208.97
Contig 43 47,263 150,898 19,898 170,796 0.66% 180.69
Contig 44 46,914 142,355 16,452 158,807 0.61% 169.25
Contig 45 43,683 117,037 13,672 130,709 0.50% 149.61
Contig 46 42,728 136,856 17,909 154,765 0.60% 181.10
Contig 47 40,842 147,237 16,917 164,154 0.63% 200.96
Contig 48 40,228 149,481 17,727 167,208 0.64% 207.82
Contig 49 38,050 131,564 15,857 147,421 0.57% 193.72
Contig 50 35,906 130,192 15,926 146,118 0.56% 203.47
Contig 51 34,624 124,180 14,254 138,434 0.53% 199.91
Contig 52 34,259 95,880 12,579 108,459 0.42% 158.29
Contig 53 32,955 99,389 12,586 111,975 0.43% 169.89
Contig 54 30,295 83,999 10,205 94,204 0.36% 155.48
Contig 55 30,027 92,903 9,671 102,574 0.40% 170.80
Contig 56 29,820 87,106 10,491 97,597 0.38% 163.64
Contig 57 29,700 110,231 12,604 122,835 0.47% 206.79
Contig 58 28,448 71,737 8,002 79,739 0.31% 140.15
Contig 59 28,416 94,892 10,173 105,065 0.41% 184.87
Contig 60 28,199 94,626 10,912 105,538 0.41% 187.13
Contig 61 27,425 87,233 10,672 97,905 0.38% 178.50
Contig 62 26,253 76,447 8,443 84,890 0.33% 161.68
Contig 63 26,199 95,119 10,884 106,003 0.41% 202.30
Contig 64 26,134 70,187 8,403 78,590 0.30% 150.36
Contig 65 25,483 73,301 8,146 81,447 0.31% 159.81
Contig 66 24,722 73,937 8,368 82,305 0.32% 166.46
Contig 67 23,596 81,708 9,614 91,322 0.35% 193.51
Contig 68 23,406 66,424 9,043 75,467 0.29% 161.21
Contig 69 22,527 66,018 8,423 74,441 0.29% 165.23
Contig 70 21,718 81,945 9,431 91,376 0.35% 210.37
Contig 71 21,353 60,756 7,882 68,638 0.26% 160.72
Contig 72 20,650 58,658 6,856 65,514 0.25% 158.63
Contig 73 20,141 76,177 8,936 85,113 0.33% 211.29
Contig 74 17,975 68,513 8,473 76,986 0.30% 214.15
Contig 75 17,695 62,719 8,209 70,928 0.27% 200.42
Contig 76 15,397 41,984 3,782 45,766 0.18% 148.62
Contig 77 15,221 41,360 5,269 46,629 0.18% 153.17
Contig 78 14,835 49,157 5,597 54,754 0.21% 184.54
Contig 79 12,985 49,775 6,055 55,830 0.22% 214.98
Contig 80 12,674 50,192 6,314 56,506 0.22% 222.92
Contig 81 12,543 41,701 5,202 46,903 0.18% 186.97
Contig 82 12,195 43,349 5,916 49,265 0.19% 201.99
Contig 83 10,828 32,184 4,376 36,560 0.14% 168.82
Contig 84 10,140 30,935 3,433 34,368 0.13% 169.47
Contig 85 6,153 17,529 2,248 19,777 0.08% 160.71
Contig 86 6,059 25,845 3,400 29,245 0.11% 241.34
Contig 87 6,056 11,647 817 12,464 0.05% 102.91
Contig 88 5,978 19,279 2,254 21,533 0.08% 180.10
Contig 89 5,868 15,967 2,329 18,296 0.07% 155.90
Contig 90 5,726 47,028 3,294 50,322 0.19% 439.42
Contig 91 5,417 36,986 5,782 42,768 0.16% 394.76
Contig 92 5,120 14,841 1,875 16,716 0.06% 163.24
Contig 93 4,823 18,972 2,138 21,110 0.08% 218.85
Contig 94 4,654 20,129 2,457 22,586 0.09% 242.65
Contig 95 4,586 11,088 1,959 13,047 0.05% 142.25
Contig 96 3,960 10,835 1,096 11,931 0.05% 150.64
Contig 97 3,914 76,308 8,718 85,026 0.33% 1086.18
Contig 98 3,708 25,715 6,540 32,255 0.12% 434.94
Contig 99 3,497 14,398 1,799 16,197 0.06% 231.58
Contig 100 3,366 11,157 1,564 12,721 0.05% 188.96
Contig 101 3,238 9,171 976 10,147 0.04% 156.69
Contig 102 3,192 8,741 870 9,611 0.04% 150.55
Contig 103 3,145 10,322 1,407 11,729 0.05% 186.47
Contig 104 3,117 6,989 576 7,565 0.03% 121.35
Contig 105 3,012 11,567 2,099 13,666 0.05% 226.86
Contig 106 2,834 5,955 440 6,395 0.02% 112.83
Contig 107 2,596 8,086 1,190 9,276 0.04% 178.66
Contig 108 2,541 9,029 1,231 10,260 0.04% 201.89
Contig 109 2,472 15,023 3,702 18,725 0.07% 378.74
Contig 110 2,348 38,103 3,997 42,100 0.16% 896.51
Contig 111 2,283 8,298 873 9,171 0.04% 200.85
Contig 112 2,150 6,140 783 6,923 0.03% 161.00
Contig 113 2,123 5,311 1,172 6,483 0.02% 152.69
Contig 114 2,020 8,238 1,112 9,350 0.04% 231.44
Contig 115 2,009 8,227 1,303 9,530 0.04% 237.18
Contig 116 1,941 4,451 438 4,889 0.02% 125.94
Contig 117 1,468 7,443 1,573 9,016 0.03% 307.08
Contig 118 1,418 10,116 2,045 12,161 0.05% 428.81
Contig 119 1,395 4,065 984 5,049 0.02% 180.97
Contig 120 1,380 27,975 3,001 30,976 0.12% 1122.32
Contig 121 1,255 7,102 1,359 8,461 0.03% 337.09
Contig 122 1,196 3,089 616 3,705 0.01% 154.89
Contig 123 1,188 5,632 1,693 7,325 0.03% 308.29
Contig 124 1,160 5,898 853 6,751 0.03% 290.99
Contig 125 1,133 5,369 1,149 6,518 0.03% 287.64
Contig 126 1,030 4,125 618 4,743 0.02% 230.24
Contig 127 1,026 5,105 532 5,637 0.02% 274.71
Contig 128 1,009 2,059 492 2,551 0.01% 126.41
Contig 129 972 2,870 692 3,562 0.01% 183.23
Contig 130 962 17,813 2,266 20,079 0.08% 1043.61
Contig 131 907 3,571 434 4,005 0.02% 220.78
Contig 132 821 3,781 750 4,531 0.02% 275.94
Contig 133 811 1,388 120 1,508 0.01% 92.97
Contig 134 798 18,452 1,767 20,219 0.08% 1266.85
Contig 135 726 2,525 425 2,950 0.01% 203.17
Contig 136 704 2,705 494 3,199 0.01% 227.20
Contig 137 683 3,375 1,206 4,581 0.02% 335.36
Contig 138 665 4,272 1,529 5,801 0.02% 436.17
Contig 139 624 2,332 397 2,729 0.01% 218.67
Contig 140 572 2,393 783 3,176 0.01% 277.62
Contig 141 533 1,698 1,049 2,747 0.01% 257.69
Contig 142 507 3,698 718 4,416 0.02% 435.50
Contig 143 507 2,038 259 2,297 0.01% 226.53
Contig 144 501 2,259 329 2,588 0.01% 258.28